Figure 2 from A RNA Virus Reference Database (RVRD) to Enhance Virus Detection in Metagenomic Data | Semantic Scholar
An example illustrating how the CD-HIT main paradigm works. Record 1 is... | Download Scientific Diagram
Frontiers | Comparison of Methods for Picking the Operational Taxonomic Units From Amplicon Sequences
Clustering
De Novo Assembly of the Transcriptome of the Non-Model Plant Streptocarpus rexii Employing a Novel Heuristic to Recover Locus-Specific Transcript Clusters | PLOS ONE
Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences.
GitHub - LeeBergstrand/CDHITtoFASTA: Extracts CD-Hit clusters which contain reference proteins and stores them in FASTA format.
Analysis and comparison of very large metagenomes with fast clustering and functional annotation Weizhong Li, BMC Bioinformatics 2009 Present by Chuan-Yih. - ppt download
Computational analysis and prediction of PE_PGRS proteins using machine learning - Computational and Structural Biotechnology Journal
CD-HIT User's Guide
CD-HIT User's Guide
EdClust: A heuristic sequence clustering method with higher sensitivity
CD-HIT User's Guide
Clustering biological sequences with dynamic sequence similarity threshold | BMC Bioinformatics | Full Text
Fast Program for Clustering and Comparing Large Sets of Protein or Nucleotide Sequences | SpringerLink
Comparison of Methods for Biological Sequence Clustering
Clustering huge protein sequence sets in linear time | Nature Communications
Frontiers | Comparison of Methods for Picking the Operational Taxonomic Units From Amplicon Sequences
A comparison of the performance of different clustering approaches. For... | Download Scientific Diagram
An example illustrating how the CD-HIT main paradigm works. Record 1 is... | Download Scientific Diagram
How to cluster peptide/protein sequences using cd-hit software? — Bioinformatics Review
PDF) CD-HIT: Accelerated for clustering the next-generation sequencing data
Sensitive clustering of protein sequences at tree-of-life scale using DIAMOND DeepClust | bioRxiv
Index of /~psgendb/birchhomedir/FTP/doc/cd-hit
CD-HIT and USEARCH report different %ids
![Swarm: robust and fast clustering method for amplicon-based studies [PeerJ]](https://dfzljdn9uc3pi.cloudfront.net/2014/593/1/fig-2-full.png "Swarm: robust and fast clustering method for amplicon-based studies [PeerJ]")
Swarm: robust and fast clustering method for amplicon-based studies [PeerJ]
Clustering redundant transcripts in OmicsBox with CD-HIT %%page%%
Genes | Free Full-Text | Ensemble-AMPPred: Robust AMP Prediction and Recognition Using the Ensemble Learning Method with a New Hybrid Feature for Differentiating AMPs
